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Owens, B.F., A.E. Lipka, M. Magallanes-Lundback, T. Tiede, C.H. Diepenbrock, C.B. Kandianis, E. Kim, J. Cepela, M. Mateos-Hernandez, C.R. Buell, E.S. Buckler, D. DellaPenna, M.A. Gore, and T. Rocheford, A foundation for provitamin A biofortification of maize: genome-wide association and genomic prediction models of carotenoid levels. Genetics, 2014. 198(4): p. 1699-1716.
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Angelovici, R., A.E. Lipka, N. Deason, S. Gonzalez-Jorge, H. Lin, J. Cepela, R. Buell, M.A. Gore, and D. DellaPenna, Genome-wide analysis of branched-chain amino acid levels in Arabidopsis seeds. Plant Cell, 2013. 25(12): p. 4827-4843.
Chandler K., Lipka AE, Owens BF, Li H, Buckler ES, Rocheford T, and Gore MA (2013). "Genetic analysis of visually scored orange kernel color in maize." Crop Science 53(1): 189-200.
Gongora-Castillo, E. and C.R. Buell, Bioinformatics challenges in de novo transcriptome assembly using short read sequences in the absence of a reference genome sequence. Natural Product Reports, 2013. 30(4): p. 490-500.
Gonzalez-Jorge, S., S.-H. Ha, M. Magallanes-Lundback, L.U. Gilliland, A. Zhou, A.E. Lipka, Y.-N. Nguyen, R. Angelovici, H. Lin, J. Cepela, H. Little, C.R. Buell, M.A. Gore, and D. DellaPenna, Carotenoid cleavage dioxygenase4 is a negative regulator of β-carotene content in Arabidopsis seeds. Plant Cell, 2013. 25(12): p. 4812-4826.
Kandianis, C.B.; Stevens. R.; Liu, W.; Palacios-Rojas, N.; Montgomery, K.; Pixley, K.; White, W.S.; Rocheford, T.(2013) Genetic architecture controlling variation in maize grain composition and concentrations in two maize populations. Theoretical and Applied Genetics 126 (11) 2879-2895
Lipka AE, Gore MA, Magallanes-Lundback M, Mesberg A, Lin H, Tiede T, Chen C, Buell CR, Buckler ES, Rocheford T, DellaPenna D. (2013) Genome-wide association study and pathway level analysis of tocochromanol levels in maize grain. G3 doi:10.1534/g3.113.006148.
Lipka AE, Tian F, Wang Q, Peiffer, J, Li M, Bradbury PJ, Gore, MA, Buckler ES, and Zhang Z (2012). "GAPIT: Genome Association and Prediction Integrated Tool." Bioinformatics 28(18):2397-2399.